This data set includes single-nucleus transcriptomes from 76,533 total nuclei derived from 2 post-mortem human brain specimens, to survey cell type diversity in the primary motor cortex (M1C or M1). The data were generated as part of a BICCN collaboration to characterize cell type diversity in M1 across species and data modalities. In total, 127 transcriptomic cell types were identified.
Read-me file with additional information about the other files in this directory.
|Table of cell metadata||23 MB||.csv||
Metadata about cells. Each entry has an _order, _label, and _color column.
|Gene expression matrix||7 GB||.csv||
Gene expression matrix provided as a csv
|Taxonomy of clusters||400 KB||.json||
Serialized cluster hierarchy with all node information embedded.
|Taxonomy information||1 KB||.txt||
Metadata about the taxonomy.
|Gene Expression by Cell Type, trimmed means||30 MB||.csv||
Gene expression aggregated per cell type, calculated as trimmed means.
|Gene Expression by Cell Type, medians||27 MB||.csv||Gene expression aggregated per cell type, calculated as medians.|
|2D coordinates||5 MB||.csv||
TSNE coordinates for each cell, as shown in the Transcriptomics Explorer.
|Sample ID Mapping||600 KB||.csv||Mapping between sample ids in metadata above and exp_component_id referenced in supplementary materials in related publication|