Connectivity
These resources are produced by the Allen Institute for Brain Science, which focuses on defining and mapping cell types of the mammalian brain, and the Allen Institute for Neural Dynamics, dedicated to understanding how dynamic neuronal signals and circuits across the brain perform fundamental computations and drive flexible behaviors.
Mouse Brain Connectivity Atlas
A brain-wide map of neural projections, including cell class-specific data.
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MICrONS Explorer
Large scale electron microscopy based reconstructions of cortical circuitry from mouse visual cortex, with corresponding functional imaging.
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EXA-SPIM MICROSCOPY
Learn more about our novel expansion-assisted selective plane illumination microscope (ExA-SPIM) allowing nanoscale imaging of cm-scale.
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Synaptic Physiology
Examine the intralaminar connectivity between neuronal subclasses in human and mouse cortex via in vitro electrophysiology
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MICrONS Explorer YouTube tutorials
MICrONS Explorer: Neuroglancer | Tutorial
MICrONS Explorer: Adding Annotations | Tutorial
MICrONS Explorer: Analyzing and Visualizing Meshes | Tutorial
MICrONS Explorer: Downloading Images and Segmentations
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