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Connectivity

These resources are produced by the Allen Institute for Brain Science, which focuses on defining and mapping cell types of the mammalian brain.

Mouse Brain Connectivity Atlas

A brain-wide map of neural projections, including cell class-specific data.

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MICrONS Explorer

Large scale electron microscopy based reconstructions of cortical circuitry from mouse visual cortex, with corresponding functional imaging.

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Synaptic Physiology

Examine the intralaminar connectivity between neuronal subclasses in human and mouse cortex via in vitro electrophysiology

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MICrONS Explorer YouTube tutorials

MICrONS Explorer: Neuroglancer | Tutorial

MICrONS Explorer: Adding Annotations | Tutorial

MICrONS Explorer: Analyzing and Visualizing Meshes | Tutorial

MICrONS Explorer: Downloading Images and Segmentations

The Allen Institute for Brain Science uses a unique approach to generate data, tools and knowledge for researchers to explore the biological complexity of the mammalian brain. This portal provides access to high quality data and web-based applications created for the benefit of the global research community.

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